STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufSCOG0520; Protein involved in cysteine desulfurase activity; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (408 aa)    
Predicted Functional Partners:
sufC
FeS assembly ATPase SufC; COG0396; Protein involved in iron-sulfur cluster assembly.
 
  
 0.987
sufD
Cysteine desulfurase activator complex subunit SufD; COG0719; Protein involved in iron-sulfur cluster assembly.
  
 
 0.923
trxB
Thioredoxin reductase; COG0492; Protein involved in oxidation reduction.
  
 
  0.903
sufB
Cysteine desulfurase activator complex subunit SufB; COG0719; Protein involved in iron-sulfur cluster assembly.
  
 
 0.877
sufE
Putative SufE Fe/S-cluster-related protein; COG2166.
  
 
 0.827
sufA
FeS assembly scaffold SufA; COG0316; Protein involved in iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
  
 
 0.769
rpmA
Ribosomal protein L27; COG0211; Belongs to the bacterial ribosomal protein bL27 family.
       0.755
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.748
iscS
Cysteine desulfurase; COG1104.
 
  
0.647
BPLAN_613
Secreted protein containing DUF192; COG1430.
       0.589
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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