STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_1258Biotin biosynthesis protein BioY. (171 aa)    
Predicted Functional Partners:
TSIB_1256
ABC-type cobalt transport system, permease component.
 
 0.983
TSIB_1257
ABC-type cobalt transport system, ATPase component.
 
 
 0.976
TSIB_1505
Putative ABC transporter ATP-binding protein.
 
 
 0.947
TSIB_0229
Biotin-(Acetyl-coA carboxylase) ligase.
 
   
 0.772
TSIB_1319
ABC-type cobalt transport system, CbiQ permease component.
  
 
 0.722
TSIB_1320
ABC-type cobalt transport system, ATPase component; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 
 0.711
TSIB_0100
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
  
 0.460
TSIB_0195
Hypothetical protein.
      
 0.443
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.