STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ribLGlycerol-3-phosphate cytidyltransferase; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme. (148 aa)    
Predicted Functional Partners:
ribK
Riboflavin kinase; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
  
  
 0.940
TSIB_1333
RNA-binding protein, containing PUA domain.
       0.818
TSIB_2020
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
 
  
 0.801
TSIB_1334
Hypothetical protein.
       0.783
TSIB_2019
Pyrophosphorylase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.707
TSIB_1335
Pfam01068, DNA_ligase_A_M, ATP dependent DNA ligase domain.
       0.613
TSIB_1569
Transaminase.
  
  
 0.599
TSIB_1010
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.556
TSIB_1823
Dolichol-phosphate mannosyltransferase, fused to membrane-bound GtrA- like domain.
  
  
 0.478
TSIB_1336
Putative tRNA-binding protein.
 
     0.462
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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