STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSIB_1780Glycogen synthase. (457 aa)    
Predicted Functional Partners:
TSIB_1585
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
  
 0.993
TSIB_1321
Phosphorylase.
 
  
 0.989
TSIB_1115
Alpha-amylase (intracellular); Belongs to the glycosyl hydrolase 57 family.
 
 0.948
TSIB_0455
4-alpha-glucanotransferase.
 
 
 0.935
TSIB_0361
Trehalose synthase.
 
  
 0.933
TSIB_1456
Fe-containing alcohol dehydrogenase.
  
  
 0.728
TSIB_1779
Predicted transcription regulator, helix-turn-helix family.
       0.676
TSIB_1781
Histidine triad (HIT) protein.
     
 0.655
TSIB_1776
Phosphopentomutase; Belongs to the phosphohexose mutase family.
  
  
 0.601
TSIB_1868
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (GAPN); Belongs to the aldehyde dehydrogenase family.
  
  
 0.598
Your Current Organism:
Thermococcus sibiricus
NCBI taxonomy Id: 604354
Other names: T. sibiricus MM 739, Thermococcus sibiricus MM 739, Thermococcus sibiricus str. MM 739, Thermococcus sibiricus strain MM 739
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.