STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BG61_21390Unannotated protein. (399 aa)    
Predicted Functional Partners:
BG61_26020
Unannotated protein.
    
 0.920
BG61_12890
Unannotated protein.
  
 
 0.883
BG61_22000
Unannotated protein.
  
 
 0.865
BG61_30510
Unannotated protein.
  
 
 0.865
mdh
Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 0.789
BG61_11605
Unannotated protein.
   
 0.770
BG61_10255
Unannotated protein.
   
 
 0.768
aroA
Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
  
 0.759
GCA_000751215_01661
Unannotated protein.
   
 0.753
sdhB
Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
 0.749
Your Current Organism:
Caballeronia glathei
NCBI taxonomy Id: 60547
Other names: ATCC 29195, Burkholderia glathei, C. glathei, CFBP 4791, CIP 105421, DSM 50014, JCM 10563, LMG 14190, LMG:14190, Paraburkholderia glathei, Pseudomonas glathei, strain N 15, strain N15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.