STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCOF1Treacle ribosome biogenesis factor 1. (1524 aa)    
Predicted Functional Partners:
DNAJC2
DnaJ heat shock protein family (Hsp40) member C2.
    
 0.661
ZNF384
Zinc finger protein 384.
   
 0.655
RNF20
E3 ubiquitin protein ligase; Belongs to the BRE1 family.
    
 
 0.638
RNF19B
RBR-type E3 ubiquitin transferase.
    
 
 0.615
SETD1A
SET domain containing 1A, histone lysine methyltransferase.
   
 0.563
CENPE
Uncharacterized protein.
  
 
 0.536
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.465
NES
Nestin; Belongs to the intermediate filament family.
  
 
  0.457
NOP56
NOP56 ribonucleoprotein.
    
 
 0.455
ZNF217
Zinc finger protein 217.
    
 0.451
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.