STRINGSTRING
XP_002163008 protein (Hydra magnipapillata) - STRING interaction network
"XP_002163008" - PREDICTED: similar to Rabenosyn-5 [Hydra magnipapillata]. in Hydra magnipapillata
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_002163008PREDICTED- similar to Rabenosyn-5 [Hydra magnipapillata]. (377 aa)    
Predicted Functional Partners:
XP_002167613
PREDICTED- similar to predicted protein, partial [Hydra magnipapillata]. (426 aa)
     
  0.991
XP_002158483
PREDICTED- similar to Rab4, partial [Hydra magnipapillata]. (138 aa)
       
  0.902
XP_002154735
PREDICTED- similar to Vacuolar protein sorting-associated protein 33B, partial [Hydra magnipapillata]. (807 aa)
     
  0.879
XP_002165089
PREDICTED- similar to vacuolar protein sorting 33 homolog A [Hydra magnipapillata]. (660 aa)
     
  0.878
XP_002158710
PREDICTED- similar to predicted protein, partial [Hydra magnipapillata]. (1076 aa)
     
  0.878
XP_002154541
PREDICTED- similar to vacuolar protein sorting 33B (yeast homolog)) [Hydra magnipapillata]. (257 aa)
     
  0.878
XP_002167518
PREDICTED- similar to putative RAB5C member RAS oncogene family, partial [Hydra magnipapillata]. (201 aa)
       
  0.847
XP_002170067
PREDICTED- similar to predicted protein [Hydra magnipapillata]. (707 aa)
     
  0.834
XP_002158788
PREDICTED- similar to predicted protein, partial [Hydra magnipapillata]. (355 aa)
     
  0.792
XP_002166664
PREDICTED- similar to syntaxin binding protein 1 [Hydra magnipapillata]. (595 aa)
     
  0.791
Your Current Organism:
Hydra magnipapillata
NCBI taxonomy Id: 6085
Other names: Anthomedusae, Athecata, Chlorohydra, Gymnoblastea, H. magnipapillata, Hydra, Hydra magnipapillata, Hydridae, Hydroida, Hydrozoa, Pelmatohydra, hydras, hydrozoans
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