STRINGSTRING
XP_002170427 protein (Hydra magnipapillata) - STRING interaction network
"XP_002170427" - PREDICTED: similar to cubilin [Hydra magnipapillata]. in Hydra magnipapillata
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_002170427PREDICTED- similar to cubilin [Hydra magnipapillata]. (1411 aa)    
Predicted Functional Partners:
XP_002160633
PREDICTED- similar to Collagen alpha-5(VI) chain [Hydra magnipapillata]. (9981 aa)
     
  0.793
XP_002161015
PREDICTED- similar to rCG59548, partial [Hydra magnipapillata]. (2476 aa)
       
  0.648
XP_002158143
PREDICTED- similar to predicted protein [Hydra magnipapillata]. (1232 aa)
       
  0.648
XP_002155280
PREDICTED- similar to low density lipoprotein receptor-related protein 6, partial [Hydra magnipapillata]. (542 aa)
       
  0.648
XP_002161962
PREDICTED- similar to fibrillar collagen [Hydra magnipapillata]. (1409 aa)
       
  0.643
XP_002158319
PREDICTED- similar to fibrillar collagen [Hydra magnipapillata]. (1525 aa)
       
  0.643
XP_002168817
PREDICTED- similar to heparan sulfate proteoglycan 2 [Hydra magnipapillata]. (640 aa)
     
  0.628
XP_002164781
PREDICTED- similar to predicted protein [Hydra magnipapillata]. (253 aa)
     
 
    0.609
XP_002164888
PREDICTED- similar to collagen, type II, alpha 1 [Hydra magnipapillata]. (1473 aa)
       
  0.553
XP_002157001
PREDICTED- similar to type IV collagen alpha 1 chain [Hydra magnipapillata]. (1733 aa)
       
  0.553
Your Current Organism:
Hydra magnipapillata
NCBI taxonomy Id: 6085
Other names: Anthomedusae, Athecata, Chlorohydra, Gymnoblastea, H. magnipapillata, Hydra, Hydra magnipapillata, Hydridae, Hydroida, Hydrozoa, Pelmatohydra, hydras, hydrozoans
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