STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL41879.1Arabinogalactan endo-1,4-beta-galactosidase; KEGG: ate:Athe_0607 Ig domain protein; PFAM: glycosyl hydrolase 53 domain protein; coagulation factor 5/8 type domain protein; Ig domain protein; Carbohydrate-binding CenC domain protein. (1084 aa)    
Predicted Functional Partners:
ADL41880.1
KEGG: ate:Athe_0608 S-layer domain protein; manually curated; PFAM: S-layer domain-containing protein.
 
    0.831
ADL42951.1
PFAM: glycoside hydrolase family 10; type 3a cellulose-binding domain protein; glycoside hydrolase family 5; KEGG: ate:Athe_1866 mannan endo-1,4-beta-mannosidase., cellulase; SMART: glycoside hydrolase family 10.
 
  
 0.743
ADL41891.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; KEGG: ate:Athe_0618 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
  
     0.731
ADL43104.1
Glycoside hydrolase family 31; KEGG: csc:Csac_1354 alpha-xylosidase YicI; manually curated; PFAM: glycoside hydrolase family 31; Belongs to the glycosyl hydrolase 31 family.
  
  
 0.723
ADL41540.1
KEGG: dth:DICTH_0009 mannan endo-1,4-beta-mannosidase; PFAM: Carbohydrate binding family 6; Belongs to the glycosyl hydrolase 26 family.
  
   
 0.698
ADL42945.1
Cellulose 1,4-beta-cellobiosidase; KEGG: ate:Athe_1860 glycoside hydrolase family 48; PFAM: glycoside hydrolase family 48; type 3a cellulose-binding domain protein; Kelch repeat type 1-containing protein.
  
     0.684
ADL42284.1
KEGG: csc:Csac_0663 mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family.
  
   
 0.656
ADL41577.1
Beta-mannosidase; KEGG: csc:Csac_0129 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 2 sugar binding; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.621
ADL42103.1
Alpha-glucuronidase; KEGG: ate:Athe_0854 alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein.
  
     0.608
ADL42025.1
KEGG: csc:Csac_0204 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
  
     0.606
Your Current Organism:
Caldicellulosiruptor obsidiansis
NCBI taxonomy Id: 608506
Other names: C. obsidiansis OB47, Caldicellulosiruptor obsidiansis OB47, Caldicellulosiruptor obsidiansis str. OB47, Caldicellulosiruptor obsidiansis strain OB47, Caldicellulosiruptor sp. OB47
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