STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL42451.1TIGRFAM: ABC-type bacteriocin transporter; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; KEGG: ate:Athe_0327 ABC-type bacteriocin transporter; SMART: AAA ATPase. (734 aa)    
Predicted Functional Partners:
ADL42452.1
PFAM: secretion protein HlyD family protein; KEGG: ate:Athe_0252 secretion protein HlyD family protein.
 
 
 0.979
ADL41652.1
PFAM: secretion protein HlyD family protein; KEGG: ate:Athe_0252 secretion protein HlyD family protein.
 
 
 0.909
ADL41651.1
TIGRFAM: ABC-type bacteriocin transporter; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; KEGG: ate:Athe_0327 ABC-type bacteriocin transporter; SMART: AAA ATPase.
  
  
 
0.900
ADL42858.1
KEGG: ate:Athe_0894 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
  
0.671
ADL42330.1
KEGG: ate:Athe_1525 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
  
0.654
ADL42340.1
PFAM: secretion protein HlyD family protein; KEGG: csc:Csac_2190 secretion protein HlyD family protein.
  
 
 0.650
ADL43323.1
KEGG: ate:Athe_2298 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; biotin/lipoyl attachment domain-containing protein.
  
 
 0.650
ADL41421.1
KEGG: ate:Athe_0048 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
  
0.643
ADL43469.1
KEGG: ate:Athe_2619 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
  
0.642
ADL42329.1
KEGG: ate:Athe_1526 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
  
0.639
Your Current Organism:
Caldicellulosiruptor obsidiansis
NCBI taxonomy Id: 608506
Other names: C. obsidiansis OB47, Caldicellulosiruptor obsidiansis OB47, Caldicellulosiruptor obsidiansis str. OB47, Caldicellulosiruptor obsidiansis strain OB47, Caldicellulosiruptor sp. OB47
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