STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhL-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (315 aa)    
Predicted Functional Partners:
ADL04295.1
KEGG: cpy:Cphy_3558 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate protein domain protein TPP-binding.
  
 0.998
ADL03298.1
TIGRFAM: pyruvate kinase; KEGG: eel:EUBELI_01133 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
  
 0.975
ADL04929.1
PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: eel:EUBELI_01448 malate dehydrogenase (oxaloacetate-decarboxylating).
  
 0.959
ADL03864.1
PFAM: aminotransferase class I and II; KEGG: eel:EUBELI_00628 aspartate aminotransferase.
  
 0.938
ADL02953.1
PFAM: formate C-acetyltransferase glycine radical; KEGG: cpy:Cphy_2821 autonomous glycyl radical cofactor GrcA.
   
 
 0.931
ADL02955.1
TIGRFAM: formate acetyltransferase; KEGG: cpy:Cphy_2823 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical.
   
 
 0.931
ADL03931.1
Pyruvate carboxylase; KEGG: eel:EUBELI_00924 oxaloacetate decarboxylase; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase.
    
 0.925
ADL05876.1
KEGG: ele:Elen_1459 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 
 0.924
pgi
KEGG: cpy:Cphy_0419 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); Belongs to the GPI family.
  
 
 0.920
ADL03534.1
TIGRFAM: pyruvate, phosphate dikinase; KEGG: eel:EUBELI_01258 pyruvate,orthophosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; Belongs to the PEP-utilizing enzyme family.
  
 
 0.920
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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