STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL04487.1PFAM: ABC-2 type transporter; KEGG: dhd:Dhaf_3151 ABC-2 type transporter. (247 aa)    
Predicted Functional Partners:
ADL04486.1
KEGG: dhd:Dhaf_3150 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.973
ADL04485.1
KEGG: dhd:Dhaf_3149 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR.
 
    0.925
ADL05593.1
PFAM: extracellular solute-binding protein family 5; KEGG: ele:Elen_2203 extracellular solute-binding protein family 5.
  
  
 0.521
ADL02966.1
PFAM: GCN5-related N-acetyltransferase; KEGG: cdl:CDR20291_1949 hypothetical protein.
  
  
 0.499
ADL04488.1
KEGG: cpy:Cphy_3282 two component AraC family transcriptional regulator; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; response regulator receiver.
       0.489
ADL03294.1
KEGG: cpy:Cphy_0279 hypothetical protein.
  
     0.477
ADL03685.1
KEGG: ere:EUBREC_3590 transporter; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.474
ADL04327.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pdi:BDI_2177 putative acetyltransferase.
  
  
 0.474
ADL03293.1
KEGG: cce:Ccel_2230 hypothetical protein.
  
     0.468
ADL04192.1
PFAM: nitroreductase; KEGG: cpy:Cphy_3255 nitroreductase.
 
  
 0.461
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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