STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL05141.1KEGG: cpy:Cphy_2122 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein. (461 aa)    
Predicted Functional Partners:
ADL05142.1
Two component transcriptional regulator, winged helix family; KEGG: cpy:Cphy_2121 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 0.969
ADL05180.1
Two component transcriptional regulator, winged helix family; KEGG: ctc:CTC01906 transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 0.805
ADL02880.1
Two component transcriptional regulator, winged helix family; KEGG: ere:EUBREC_0924 response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 0.800
ADL02994.1
Two component transcriptional regulator, winged helix family; KEGG: cpy:Cphy_0154 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 0.785
ADL06011.1
Two component transcriptional regulator, winged helix family; KEGG: cpy:Cphy_2855 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 0.780
ADL05793.1
Two component transcriptional regulator, winged helix family; KEGG: cpy:Cphy_1954 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 0.777
ADL05149.1
PFAM: Heavy metal transport/detoxification protein; cytochrome c biogenesis protein transmembrane region; KEGG: cpy:Cphy_2119 heavy metal transport/detoxification protein.
 
     0.758
ADL04729.1
Two component transcriptional regulator, winged helix family; KEGG: cth:Cthe_1600 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 0.753
ADL05288.1
Two component transcriptional regulator, winged helix family; KEGG: ckr:CKR_3134 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 
 0.747
ADL05681.1
Two component transcriptional regulator, winged helix family; KEGG: ckr:CKR_3402 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 0.747
Your Current Organism:
Clostridium saccharolyticum WM1
NCBI taxonomy Id: 610130
Other names: Clostridium saccharolyticum DSM 2544, [. saccharolyticum WM1, [Clostridium] saccharolyticum WM1
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