STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1VX74Cysteine proteinase. (1007 aa)    
Predicted Functional Partners:
A0A1Y1W4K6
B30.2/SPRY domain-containing protein.
   
 0.985
A0A1Y1W4B3
Ubiquitin.
    
 0.806
A0A1Y1WER4
Uncharacterized protein.
    
  0.753
A0A1Y1WD48
Ubiquitin carboxyl-terminal hydrolase.
    
 0.748
A0A1Y1WCX9
Translation protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.743
A0A1Y1W8A2
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.742
A0A1Y1VXF4
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.737
A0A1Y1W4C2
Glucocorticoid receptor-like (DNA-binding domain).
    
 
 0.724
A0A1Y1WFE2
Ubiquitin-domain-containing protein.
    
 0.719
A0A1Y1W466
BIR-domain-containing protein.
    
 0.713
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.