STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W5M0Adenylosuccinate lyase. (424 aa)    
Predicted Functional Partners:
A0A1Y1WFG6
Phosphoribosylamine--glycine ligase.
  
 0.993
A0A1Y1WLT4
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis.
  
 0.992
A0A1Y1WIK6
AICARFT/IMPCHase bienzyme.
  
 0.983
A0A1Y1VYF8
Amidophosphoribosyltransferase.
  
 
 0.979
A0A1Y1WKF4
UreD-domain-containing protein.
  
 0.979
A0A1Y1VYZ9
Phosphoribosylglycinamide formyltransferase.
  
 0.968
A0A1Y1W0C4
Phosphoribosylglycinamide formyltransferase.
  
 0.968
A0A1Y1VW89
Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.
  
 0.967
A0A1Y1WB25
Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.
  
 0.967
A0A1Y1W2C3
Phosphoribosylformylglycinamidin.
  
  
 0.965
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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