STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1W9I4Uncharacterized protein. (145 aa)    
Predicted Functional Partners:
A0A1Y1W6E3
MRP-L46 domain-containing protein.
   
 
 0.993
A0A1Y1W7J8
Uncharacterized protein.
   
 
 0.991
A0A1Y1W0J4
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.990
A0A1Y1W804
Uncharacterized protein.
   
 
 0.990
A0A1Y1W8I9
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.989
A0A1Y1VZ74
Uncharacterized protein.
   
 
 0.986
A0A1Y1W578
Uncharacterized protein.
   
   0.986
A0A1Y1WGV0
MRP-L47-domain-containing protein.
   
 
 0.986
A0A1Y1W951
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.985
A0A1Y1WLB9
Ribosomal protein L4.
   
 
 0.985
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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