STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WFY6Subtilisin-like protein; Belongs to the peptidase S8 family. (848 aa)    
Predicted Functional Partners:
A0A1Y1VV71
Telo_bind domain-containing protein.
    
 0.715
A0A1Y1WJX0
Erf4 domain-containing protein.
    
 0.689
A0A1Y1W1H3
Uncharacterized protein.
    
  0.646
A0A1Y1WKV4
AAA_23 domain-containing protein.
    
 0.606
A0A1Y1WLR3
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.586
A0A1Y1WA24
tRNA_int_endo domain-containing protein.
    
 0.519
A0A1Y1W5W7
DNA polymerase.
    
  0.517
A0A1Y1W1L5
Dna2-domain-containing protein.
    
  0.505
A0A1Y1W095
Putative rRNA pseudouridine synthase.
    
 0.502
A0A1Y1W0I0
Pseudouridine synthase.
    
 0.502
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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