STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y1WGQ4Uncharacterized protein. (828 aa)    
Predicted Functional Partners:
A0A1Y1VZN9
Uncharacterized protein.
    
 0.773
A0A1Y1W615
Uncharacterized protein.
   
 0.764
A0A1Y1W9T9
Uncharacterized protein.
    
 0.745
A0A1Y1WCB9
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.734
A0A1Y1WCA9
Nuclear cap-binding protein subunit 2.
    
 0.724
A0A1Y1VYT4
G-patch_2 domain-containing protein.
   
 0.719
A0A1Y1W2W8
Uncharacterized protein.
    
 0.717
A0A1Y1WMC3
ATP-dependent RNA helicase FAL1.
    
  0.717
A0A1Y1W0K3
Mago nashi protein.
    
 0.695
A0A1Y1W9Y8
RRM domain-containing protein.
    
  0.654
Your Current Organism:
Linderina pennispora
NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237
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