Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DUSP16 | MAP2K7 | ENSRBIP00000037246 | ENSRBIP00000036711 | Dual specificity phosphatase 16. | Mitogen-activated protein kinase kinase 7. | 0.539 |
DUSP16 | MAPK10 | ENSRBIP00000037246 | ENSRBIP00000003315 | Dual specificity phosphatase 16. | Mitogen-activated protein kinase. | 0.984 |
DUSP16 | MAPK9 | ENSRBIP00000037246 | ENSRBIP00000007051 | Dual specificity phosphatase 16. | Mitogen-activated protein kinase. | 0.956 |
DUSP8 | MAP2K7 | ENSRBIP00000010292 | ENSRBIP00000036711 | Dual specificity phosphatase 8. | Mitogen-activated protein kinase kinase 7. | 0.539 |
DUSP8 | MAPK10 | ENSRBIP00000010292 | ENSRBIP00000003315 | Dual specificity phosphatase 8. | Mitogen-activated protein kinase. | 0.964 |
DUSP8 | MAPK9 | ENSRBIP00000010292 | ENSRBIP00000007051 | Dual specificity phosphatase 8. | Mitogen-activated protein kinase. | 0.956 |
FOS | MAPK10 | ENSRBIP00000024863 | ENSRBIP00000003315 | Fos proto-oncogene, AP-1 transcription factor subunit. | Mitogen-activated protein kinase. | 0.968 |
FOS | MAPK9 | ENSRBIP00000024863 | ENSRBIP00000007051 | Fos proto-oncogene, AP-1 transcription factor subunit. | Mitogen-activated protein kinase. | 0.966 |
FOS | TP53 | ENSRBIP00000024863 | ENSRBIP00000028632 | Fos proto-oncogene, AP-1 transcription factor subunit. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.639 |
MAP2K4 | MAP2K7 | ENSRBIP00000030027 | ENSRBIP00000036711 | Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily. | Mitogen-activated protein kinase kinase 7. | 0.968 |
MAP2K4 | MAP3K1 | ENSRBIP00000030027 | ENSRBIP00000001091 | Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily. | Mitogen-activated protein kinase kinase kinase 1. | 0.988 |
MAP2K4 | MAPK10 | ENSRBIP00000030027 | ENSRBIP00000003315 | Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily. | Mitogen-activated protein kinase. | 0.989 |
MAP2K4 | MAPK9 | ENSRBIP00000030027 | ENSRBIP00000007051 | Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily. | Mitogen-activated protein kinase. | 0.992 |
MAP2K7 | DUSP16 | ENSRBIP00000036711 | ENSRBIP00000037246 | Mitogen-activated protein kinase kinase 7. | Dual specificity phosphatase 16. | 0.539 |
MAP2K7 | DUSP8 | ENSRBIP00000036711 | ENSRBIP00000010292 | Mitogen-activated protein kinase kinase 7. | Dual specificity phosphatase 8. | 0.539 |
MAP2K7 | MAP2K4 | ENSRBIP00000036711 | ENSRBIP00000030027 | Mitogen-activated protein kinase kinase 7. | Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily. | 0.968 |
MAP2K7 | MAP3K1 | ENSRBIP00000036711 | ENSRBIP00000001091 | Mitogen-activated protein kinase kinase 7. | Mitogen-activated protein kinase kinase kinase 1. | 0.984 |
MAP2K7 | MAPK10 | ENSRBIP00000036711 | ENSRBIP00000003315 | Mitogen-activated protein kinase kinase 7. | Mitogen-activated protein kinase. | 0.984 |
MAP2K7 | MAPK8IP1 | ENSRBIP00000036711 | ENSRBIP00000042259 | Mitogen-activated protein kinase kinase 7. | Mitogen-activated protein kinase 8 interacting protein 1. | 0.980 |
MAP2K7 | MAPK9 | ENSRBIP00000036711 | ENSRBIP00000007051 | Mitogen-activated protein kinase kinase 7. | Mitogen-activated protein kinase. | 0.986 |
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