STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL13999.1Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family. (318 aa)    
Predicted Functional Partners:
AKL10861.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.823
AKL15332.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.533
AKL13427.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
AKL12087.1
Virulence effector SrfC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
AKL12391.1
Putative phage-encoded protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.485
AKL13451.1
Extensin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.477
AKL14058.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.475
AKL12085.1
ssrAB-activated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.462
AKL13460.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
AKL13468.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.407
Your Current Organism:
Kluyvera intermedia
NCBI taxonomy Id: 61648
Other names: ATCC 33110, CCUG 14183, CIP 79.27, CUETM 77-130, DSM 4581, Enterobacter intermedium, Enterobacter intermedius, Enterobacter intrermedium, K. intermedia, Kluyvera cochleae, LMG 2785, LMG:2785, NBRC 102594, NCTC 12125, strain Gavini E 86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.