STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001299PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1. (207 aa)    
Predicted Functional Partners:
ENSACIP00000006258
RAD51 paralog C.
     
  0.820
ENSACIP00000012746
Uncharacterized protein.
     
  0.820
ENSACIP00000004310
Proteasome 26S subunit, non-ATPase 4a.
   
   0.773
ENSACIP00000014210
Proteasome 26S subunit, non-ATPase 4b.
   
   0.773
ENSACIP00000005496
Tower domain-containing protein.
     
  0.765
ENSACIP00000005531
Uncharacterized protein.
     
  0.765
RTEL1
Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...]
     
  0.765
ENSACIP00000013477
BRCA1 interacting protein C-terminal helicase 1.
     
  0.765
ENSACIP00000014779
FRA10A associated CGG repeat 1.
      
 0.758
ENSACIP00000002148
UBA domain containing 1.
      
 0.732
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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