STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000001650Tripartite motif containing 66. (775 aa)    
Predicted Functional Partners:
ENSACIP00000001499
Tripartite motif containing 44.
    
 
 0.745
ENSACIP00000002595
Chromobox homolog 3a (HP1 gamma homolog, Drosophila).
    
 0.691
CBX1
Chromobox homolog 1b (HP1 beta homolog Drosophila).
    
 0.691
ENSACIP00000016643
Chromobox homolog 5 (HP1 alpha homolog, Drosophila).
    
 0.691
CBX1-2
Uncharacterized protein.
    
 0.691
ENSACIP00000001689
Tripartite motif containing 8b.
      
 0.679
ENSACIP00000029206
RING-type domain-containing protein.
      
 0.679
TRIM62
Tripartite motif containing 62.
      
 0.636
TRIM62-2
Tripartite motif containing 62.
      
 0.636
ENSACIP00000027004
Butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1.
      
 0.598
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.