STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q0KDJ2Putative tbc1 domain family member. (767 aa)    
Predicted Functional Partners:
A0A3Q0KFR8
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.939
Smp_050350.1
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.939
A0A3Q0KT62
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.925
A0A3Q0KV94
Putative vacuolar protein sorting 26, vps26.
   
 
 0.898
Smp_194930
TBC1 domain family.
    
 
 0.681
A0A3Q0KGF1
Tubby-like protein; Belongs to the TUB family.
    
 
 0.674
Smp_091730
Putative sorting nexin.
    
 
 0.656
A0A3Q0KRS3
Rab6, putative.
   
 
 0.641
Smp_163580
Rab6, putative.
   
 
 0.641
A0A5K4F5R0
Uncharacterized protein.
   
  
 0.632
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.