A0A3Q0KNL2 protein (Schistosoma mansoni) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A3Q0KNL2

Putative thymidine kinase. (1110 aa)

Predicted Functional Partners:

Smp_042590.1

0.933

A0A3Q0KC95

0.931

A0A3Q0KJ51

0.930

Smp_015860

0.930

c4297_g1_i1

0.923

Smp_058150.1

0.915

A0A3Q0KEI5

0.914

Smp_047060

0.909

Smp_054200

0.907

Smp_194170

0.905

Your Current Organism:

Schistosoma mansoni

NCBI taxonomy Id: 6183
Other names: S. mansoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q0KC95	A0A3Q0KEI5	A0A3Q0KC95	A0A3Q0KEI5	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Putative nadh-ubiquinone oxidoreductase ashi subunit.	0.999
A0A3Q0KC95	A0A3Q0KJ51	A0A3Q0KC95	A0A3Q0KJ51	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	NADH-ubiquinone oxidoreductase mitochondrial, putative; Belongs to the complex I 30 kDa subunit family.	0.999
A0A3Q0KC95	A0A3Q0KNL2	A0A3Q0KC95	A0A3Q0KNL2	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Putative thymidine kinase.	0.931
A0A3Q0KC95	Smp_015860	A0A3Q0KC95	G4VSN6	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.998
A0A3Q0KC95	Smp_042590.1	A0A3Q0KC95	G4VRD9	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Putative nadh-ubiquinone oxidoreductase 1, chain.	0.999
A0A3Q0KC95	Smp_047060	A0A3Q0KC95	G4VNA0	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Uncharacterized protein; Belongs to the complex I LYR family.	0.999
A0A3Q0KC95	Smp_054200	A0A3Q0KC95	G4LYK7	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	NADH-ubiquinone oxidoreductase sgdh subunit,putative.	0.995
A0A3Q0KC95	Smp_058150.1	A0A3Q0KC95	G4VK46	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Uncharacterized protein.	0.999
A0A3Q0KC95	Smp_194170	A0A3Q0KC95	G4V672	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Putative f1.	0.999
A0A3Q0KC95	c4297_g1_i1	A0A3Q0KC95	A0A146MHS2	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	Uncharacterized protein; Belongs to the complex I LYR family.	0.999
A0A3Q0KEI5	A0A3Q0KC95	A0A3Q0KEI5	A0A3Q0KC95	Putative nadh-ubiquinone oxidoreductase ashi subunit.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.999
A0A3Q0KEI5	A0A3Q0KJ51	A0A3Q0KEI5	A0A3Q0KJ51	Putative nadh-ubiquinone oxidoreductase ashi subunit.	NADH-ubiquinone oxidoreductase mitochondrial, putative; Belongs to the complex I 30 kDa subunit family.	0.999
A0A3Q0KEI5	A0A3Q0KNL2	A0A3Q0KEI5	A0A3Q0KNL2	Putative nadh-ubiquinone oxidoreductase ashi subunit.	Putative thymidine kinase.	0.914
A0A3Q0KEI5	Smp_015860	A0A3Q0KEI5	G4VSN6	Putative nadh-ubiquinone oxidoreductase ashi subunit.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.999
A0A3Q0KEI5	Smp_042590.1	A0A3Q0KEI5	G4VRD9	Putative nadh-ubiquinone oxidoreductase ashi subunit.	Putative nadh-ubiquinone oxidoreductase 1, chain.	0.999
A0A3Q0KEI5	Smp_047060	A0A3Q0KEI5	G4VNA0	Putative nadh-ubiquinone oxidoreductase ashi subunit.	Uncharacterized protein; Belongs to the complex I LYR family.	0.999
A0A3Q0KEI5	Smp_054200	A0A3Q0KEI5	G4LYK7	Putative nadh-ubiquinone oxidoreductase ashi subunit.	NADH-ubiquinone oxidoreductase sgdh subunit,putative.	0.999
A0A3Q0KEI5	Smp_058150.1	A0A3Q0KEI5	G4VK46	Putative nadh-ubiquinone oxidoreductase ashi subunit.	Uncharacterized protein.	0.999
A0A3Q0KEI5	Smp_194170	A0A3Q0KEI5	G4V672	Putative nadh-ubiquinone oxidoreductase ashi subunit.	Putative f1.	0.999
A0A3Q0KEI5	c4297_g1_i1	A0A3Q0KEI5	A0A146MHS2	Putative nadh-ubiquinone oxidoreductase ashi subunit.	Uncharacterized protein; Belongs to the complex I LYR family.	0.999