STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_161580RING-type domain-containing protein. (315 aa)    
Predicted Functional Partners:
Smp_026260
Putative rnf5.
 
    
 0.957
A0A3Q0KDD9
Putative vacuolar protein sorting (Vps33); Belongs to the STXBP/unc-18/SEC1 family.
   
    0.593
Smp_159940
DUF2040 domain-containing protein.
      
 0.489
A0A5K4F3K9
Uncharacterized protein.
      
 0.444
A0A5K4F402
Uncharacterized protein.
      
 0.444
A0A5K4EK69
Uncharacterized protein.
      
 0.420
A0A5K4EKW8
Uncharacterized protein.
      
 0.420
Smp_123040
RING-type domain-containing protein.
      
 0.420
Smp_141490
Putative ring finger protein 151.
      
 0.420
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.