STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smp_156880Sec24-related C, d. (980 aa)    
Predicted Functional Partners:
A0A5K4EIV9
Protein transport protein SEC23.
   
0.998
A0A3Q0KVF0
Sec31-related protein.
   
 0.997
A0A5K4F275
Uncharacterized protein.
   
0.994
A0A3Q0KJQ2
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
0.988
A0A5K4F2D3
Uncharacterized protein.
   
 0.978
A0A5K4F2P8
Uncharacterized protein.
   
 0.978
A0A3Q0KKE7
Rgpr-related.
   
 0.969
A0A5K4EJS8
Rgpr-related.
   
 0.969
A0A5K4F1W5
Uncharacterized protein.
   
0.967
Smp_073590
GTP-binding protein-like protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 
 0.955
Your Current Organism:
Schistosoma mansoni
NCBI taxonomy Id: 6183
Other names: S. mansoni
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