Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASCL1 | GSX1 | ENSNLEP00000027743 | ENSNLEP00000000426 | Achaete-scute family bHLH transcription factor 1. | GS homeobox 1. | 0.471 |
CUX1 | GSX1 | ENSNLEP00000010125 | ENSNLEP00000000426 | Homeobox protein cut-like. | GS homeobox 1. | 0.440 |
CUX1 | TBR1 | ENSNLEP00000010125 | ENSNLEP00000040161 | Homeobox protein cut-like. | T-box_assoc domain-containing protein. | 0.492 |
CUX1 | TBR1-2 | ENSNLEP00000010125 | ENSNLEP00000002430 | Homeobox protein cut-like. | Uncharacterized protein. | 0.492 |
GSX1 | ASCL1 | ENSNLEP00000000426 | ENSNLEP00000027743 | GS homeobox 1. | Achaete-scute family bHLH transcription factor 1. | 0.471 |
GSX1 | CUX1 | ENSNLEP00000000426 | ENSNLEP00000010125 | GS homeobox 1. | Homeobox protein cut-like. | 0.440 |
GSX1 | L1CAM | ENSNLEP00000000426 | ENSNLEP00000016553 | GS homeobox 1. | L1 cell adhesion molecule. | 0.453 |
GSX1 | OPCML | ENSNLEP00000000426 | ENSNLEP00000043089 | GS homeobox 1. | Opioid binding protein/cell adhesion molecule like. | 0.535 |
GSX1 | PBX1 | ENSNLEP00000000426 | ENSNLEP00000030519 | GS homeobox 1. | PBX homeobox 1. | 0.419 |
GSX1 | PBX2 | ENSNLEP00000000426 | ENSNLEP00000008069 | GS homeobox 1. | PBX homeobox 2. | 0.435 |
GSX1 | PBX4 | ENSNLEP00000000426 | ENSNLEP00000007668 | GS homeobox 1. | PBX homeobox 4. | 0.419 |
GSX1 | RNF38 | ENSNLEP00000000426 | ENSNLEP00000004639 | GS homeobox 1. | Ring finger protein 38. | 0.638 |
GSX1 | TBR1 | ENSNLEP00000000426 | ENSNLEP00000040161 | GS homeobox 1. | T-box_assoc domain-containing protein. | 0.544 |
GSX1 | TBR1-2 | ENSNLEP00000000426 | ENSNLEP00000002430 | GS homeobox 1. | Uncharacterized protein. | 0.544 |
L1CAM | GSX1 | ENSNLEP00000016553 | ENSNLEP00000000426 | L1 cell adhesion molecule. | GS homeobox 1. | 0.453 |
L1CAM | OPCML | ENSNLEP00000016553 | ENSNLEP00000043089 | L1 cell adhesion molecule. | Opioid binding protein/cell adhesion molecule like. | 0.438 |
L1CAM | RNF38 | ENSNLEP00000016553 | ENSNLEP00000004639 | L1 cell adhesion molecule. | Ring finger protein 38. | 0.683 |
OPCML | GSX1 | ENSNLEP00000043089 | ENSNLEP00000000426 | Opioid binding protein/cell adhesion molecule like. | GS homeobox 1. | 0.535 |
OPCML | L1CAM | ENSNLEP00000043089 | ENSNLEP00000016553 | Opioid binding protein/cell adhesion molecule like. | L1 cell adhesion molecule. | 0.438 |
OPCML | RNF38 | ENSNLEP00000043089 | ENSNLEP00000004639 | Opioid binding protein/cell adhesion molecule like. | Ring finger protein 38. | 0.782 |
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