Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATXN10 | CACNA1A | ENSNLEP00000016580 | ENSNLEP00000029281 | Ataxin 10. | Voltage-dependent P/Q-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1A gives rise to P and/or Q- type calcium currents. | 0.697 |
ATXN10 | SPTBN2 | ENSNLEP00000016580 | ENSNLEP00000040061 | Ataxin 10. | Spectrin beta chain; Belongs to the spectrin family. | 0.709 |
ATXN10 | TTBK2 | ENSNLEP00000016580 | ENSNLEP00000025392 | Ataxin 10. | Uncharacterized protein; Belongs to the intermediate filament family. | 0.665 |
BYSL | LTV1 | ENSNLEP00000046400 | ENSNLEP00000036631 | Bystin like. | LTV1 ribosome biogenesis factor. | 0.999 |
BYSL | NOB1 | ENSNLEP00000046400 | ENSNLEP00000006767 | Bystin like. | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 0.999 |
BYSL | RIOK2 | ENSNLEP00000046400 | ENSNLEP00000017614 | Bystin like. | RIO kinase 2. | 0.988 |
BYSL | TTBK2 | ENSNLEP00000046400 | ENSNLEP00000025392 | Bystin like. | Uncharacterized protein; Belongs to the intermediate filament family. | 0.724 |
CACNA1A | ATXN10 | ENSNLEP00000029281 | ENSNLEP00000016580 | Voltage-dependent P/Q-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1A gives rise to P and/or Q- type calcium currents. | Ataxin 10. | 0.697 |
CACNA1A | SPTBN2 | ENSNLEP00000029281 | ENSNLEP00000040061 | Voltage-dependent P/Q-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1A gives rise to P and/or Q- type calcium currents. | Spectrin beta chain; Belongs to the spectrin family. | 0.641 |
CACNA1A | TTBK2 | ENSNLEP00000029281 | ENSNLEP00000025392 | Voltage-dependent P/Q-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1A gives rise to P and/or Q- type calcium currents. | Uncharacterized protein; Belongs to the intermediate filament family. | 0.587 |
CEP164 | RAB3IP | ENSNLEP00000024092 | ENSNLEP00000004874 | Centrosomal protein 164. | RAB3A interacting protein. | 0.814 |
CEP164 | TTBK2 | ENSNLEP00000024092 | ENSNLEP00000025392 | Centrosomal protein 164. | Uncharacterized protein; Belongs to the intermediate filament family. | 0.883 |
LTV1 | BYSL | ENSNLEP00000036631 | ENSNLEP00000046400 | LTV1 ribosome biogenesis factor. | Bystin like. | 0.999 |
LTV1 | NOB1 | ENSNLEP00000036631 | ENSNLEP00000006767 | LTV1 ribosome biogenesis factor. | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | 0.999 |
LTV1 | RIOK2 | ENSNLEP00000036631 | ENSNLEP00000017614 | LTV1 ribosome biogenesis factor. | RIO kinase 2. | 0.997 |
LTV1 | TTBK2 | ENSNLEP00000036631 | ENSNLEP00000025392 | LTV1 ribosome biogenesis factor. | Uncharacterized protein; Belongs to the intermediate filament family. | 0.773 |
NOB1 | BYSL | ENSNLEP00000006767 | ENSNLEP00000046400 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | Bystin like. | 0.999 |
NOB1 | LTV1 | ENSNLEP00000006767 | ENSNLEP00000036631 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | LTV1 ribosome biogenesis factor. | 0.999 |
NOB1 | RIOK2 | ENSNLEP00000006767 | ENSNLEP00000017614 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | RIO kinase 2. | 0.997 |
NOB1 | TTBK2 | ENSNLEP00000006767 | ENSNLEP00000025392 | RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. | Uncharacterized protein; Belongs to the intermediate filament family. | 0.629 |
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