Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX42 | GPN2 | ENSNLEP00000005233 | ENSNLEP00000011424 | DEAD-box helicase 42. | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.695 |
DDX42 | TMEM35B | ENSNLEP00000005233 | ENSNLEP00000004254 | DEAD-box helicase 42. | Transmembrane protein 35B. | 0.677 |
GPN1 | GPN2 | ENSNLEP00000004843 | ENSNLEP00000011424 | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.913 |
GPN1 | POLR2B | ENSNLEP00000004843 | ENSNLEP00000010889 | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.865 |
GPN1 | POLR2C | ENSNLEP00000004843 | ENSNLEP00000003673 | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | RNA polymerase II subunit C. | 0.830 |
GPN1 | POLR2J | ENSNLEP00000004843 | ENSNLEP00000046457 | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | Uncharacterized protein. | 0.730 |
GPN1 | RPAP1 | ENSNLEP00000004843 | ENSNLEP00000016890 | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | RNA polymerase II associated protein 1. | 0.864 |
GPN2 | DDX42 | ENSNLEP00000011424 | ENSNLEP00000005233 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | DEAD-box helicase 42. | 0.695 |
GPN2 | GPN1 | ENSNLEP00000011424 | ENSNLEP00000004843 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | 0.913 |
GPN2 | ITSN1 | ENSNLEP00000011424 | ENSNLEP00000048437 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | Intersectin 1. | 0.718 |
GPN2 | ITSN2 | ENSNLEP00000011424 | ENSNLEP00000001028 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | Intersectin 2. | 0.847 |
GPN2 | POLR2B | ENSNLEP00000011424 | ENSNLEP00000010889 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.904 |
GPN2 | POLR2C | ENSNLEP00000011424 | ENSNLEP00000003673 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RNA polymerase II subunit C. | 0.770 |
GPN2 | POLR2J | ENSNLEP00000011424 | ENSNLEP00000046457 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | Uncharacterized protein. | 0.704 |
GPN2 | POLR2L | ENSNLEP00000011424 | ENSNLEP00000010593 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RNA polymerase II subunit L. | 0.835 |
GPN2 | RPAP1 | ENSNLEP00000011424 | ENSNLEP00000016890 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RNA polymerase II associated protein 1. | 0.915 |
GPN2 | TMEM35B | ENSNLEP00000011424 | ENSNLEP00000004254 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | Transmembrane protein 35B. | 0.694 |
ITSN1 | GPN2 | ENSNLEP00000048437 | ENSNLEP00000011424 | Intersectin 1. | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.718 |
ITSN1 | ITSN2 | ENSNLEP00000048437 | ENSNLEP00000001028 | Intersectin 1. | Intersectin 2. | 0.921 |
ITSN2 | GPN2 | ENSNLEP00000001028 | ENSNLEP00000011424 | Intersectin 2. | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.847 |
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