STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS41819.1Choline-sulfatase. (507 aa)    
Predicted Functional Partners:
SIS46348.1
5-histidylcysteine sulfoxide synthase/putative 4-mercaptohistidine N1-methyltranferase.
  
   0.873
SIS99374.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
   0.859
SIS57940.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
    
 0.789
SIS44519.1
tRNAHis guanylyltransferase.
  
     0.763
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.733
SIS57313.1
Dihydromonapterin reductase / dihydrofolate reductase.
  
 
 0.718
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.711
SIS58040.1
DNA repair protein RadD.
    
   0.710
SIS41827.1
Glycine betaine/proline transport system substrate-binding protein.
 
     0.704
SIS41677.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
 
 0.655
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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