STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS87265.1Ca-activated chloride channel family protein. (328 aa)    
Predicted Functional Partners:
SIS87295.1
Protein of unknown function DUF58.
 
  
 0.964
SIS87239.1
Oxygen tolerance.
 
   
 0.956
SIS87310.1
MoxR-like ATPase.
 
 
 0.955
SIS87280.1
Protein of unknown function.
 
     0.954
SIS87252.1
Ca-activated chloride channel family protein.
   
0.869
SIS60430.1
Oxygen tolerance.
 
   
 0.804
SIS99998.1
MoxR-like ATPase.
 
 
 0.614
tpm
Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.
 
 
 0.567
SIS55724.1
Ferredoxin-NADP reductase.
   
 
  0.563
SIS94531.1
Hypothetical protein.
   
 
  0.563
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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