STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT04745.1N-carbamoyl-L-amino-acid hydrolase. (403 aa)    
Predicted Functional Partners:
SIS70503.1
OHCU decarboxylase.
  
 0.948
SIS68465.1
Diaminopropionate ammonia-lyase.
 
 0.848
SIS70484.1
Putative urate catabolism protein.
 
  
 0.790
argA
N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily.
  
 
 0.785
SIS45040.1
(S)-ureidoglycine aminohydrolase.
  
 
 0.719
SIT10525.1
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
 
 
  0.695
SIS70627.1
Serine-glyoxylate aminotransferase apoenzyme.
  
 
  0.653
SIS96144.1
4Fe-4S binding domain-containing protein.
  
 
  0.650
SIT04771.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.612
SIT04784.1
Peptide/nickel transport system permease protein.
  
    0.607
Your Current Organism:
Neptunomonas antarctica
NCBI taxonomy Id: 619304
Other names: CCTCC AB 209086, KACC 14056, N. antarctica, Neptunomonas antarctica Zhang et al. 2010, Neptunomonas sp. S3-22, strain S3-22
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