STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_01379Geranylgeranyl transferase type-2 subunit alpha. (613 aa)    
Predicted Functional Partners:
EGR_09155
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.998
EGR_06415
Ras-related protein Rab-39B.
    
 0.827
EGR_04633
Putative GTP-binding protein Parf.
    
 0.751
EGR_05320
Ras-related protein RABD2A.
    
 0.745
EGR_06492
GTP-binding protein YPT1.
    
 0.745
EGR_09444
RAB6A member RAS oncogene family.
    
 0.741
EGR_01000
Ras-related protein Rab-5B.
    
 0.724
EGR_00874
Ras-related protein RabJ.
    
 0.724
EGR_06615
Ras-related protein Rab-27A.
     
 0.682
EGR_03275
Ras-related protein Rab-3.
    
 0.674
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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