STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_09651Protein unc-13 B. (1606 aa)    
Predicted Functional Partners:
EGR_08818
Regulating synaptic membrane exocytosis protein.
    
 0.996
EGR_03848
Protein piccolo.
   
 0.645
EGR_05913
Calcium/calmodulin-dependent protein kinase.
   
 
 0.640
EGR_05914
Peripheral plasma membrane protein CASK.
   
 
 0.640
EGR_01323
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
   
 
 0.640
EGR_06796
Syntaxin-binding protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.545
EGR_03774
Syntaxin 1a; Belongs to the syntaxin family.
   
 0.544
EGR_03083
Syntaxin; Belongs to the syntaxin family.
   
 0.544
EGR_01787
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.542
EGR_03275
Ras-related protein Rab-3.
   
 
 0.535
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.