STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_06837Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
EGR_06838
Uncharacterized protein.
 
      0.839
EGR_05978
BRCA1-associated RING domain protein.
    
 0.758
EGR_03690
60S ribosomal protein L21.
   
 
 0.730
EGR_07169
39S ribosomal protein L2.
   
 
 0.713
EGR_00625
Ubiquitin.
    
 0.692
EGR_08092
Uncharacterized protein.
   
 
 0.668
EGR_09984
LYR motif containing protein 4; Belongs to the complex I LYR family.
    
 
 0.662
EGR_02356
60S ribosomal protein L13a.
   
 
 0.654
EGR_05485
60S ribosomal protein L8.
   
 
 0.630
EGR_05487
Uncharacterized protein.
   
 
 0.630
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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