STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_02783WD repeat-containing protein. (620 aa)    
Predicted Functional Partners:
EGR_00500
Protein unc-79.
    
 0.981
EGR_00423
Retinoblastoma-binding protein.
   
 0.880
EGR_01202
Set1/Ash2 histone methyltransferase complex subunit ASH2.
   
 0.878
EGR_08554
Histone-lysine N-methyltransferase SETD1B.
   
 0.854
EGR_06471
Coiled-coil domain-containing protein.
   
 
 0.853
EGR_02121
Rhabdoid tumor deletion region protein.
   
 
 0.790
EGR_06772
Parkin coregulated gene protein.
   
 
 0.776
EGR_02942
Uncharacterized protein.
   
   0.772
EGR_08396
Tektin-2.
   
   0.771
EGR_05728
EF-hand domain-containing family member B.
   
   0.770
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.