STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_02572GDP-fucose protein O-fucosyltransferase 2. (474 aa)    
Predicted Functional Partners:
EGR_09490
Spondin-1.
     
 0.696
EGR_07157
ADAMTS-like protein 3.
     
 0.634
EGR_02721
Fucosidase alpha L 1 tissue; Belongs to the glycosyl hydrolase 29 family.
      
 0.537
EGR_08814
Disco-interacting protein.
     
 0.532
EGR_04549
Pyridoxal kinase.
      
 0.531
EGR_03129
ERF1 methyltransferase catalytic subunit mtq2.
      
 0.525
EGR_08973
Ubiquitin hydrolase; Belongs to the peptidase C19 family.
     
 0.493
EGR_04012
RPE-spondin.
     
 0.493
EGR_00260
GDP-fucose transporter.
      
 0.410
EGR_06479
A disintegrin and metalloproteinase with thrombospondin motifs.
     
 0.409
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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