STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_03033Neurogenic locus Notch protein. (1675 aa)    
Predicted Functional Partners:
EGR_08391
Leucine-rich repeat serine/threonine-protein kinase.
   
 0.745
EGR_08390
Leucine-rich repeat serine/threonine-protein kinase.
   
 0.745
EGR_07361
Uncharacterized protein.
   
 0.639
EGR_08474
E3 ubiquitin-protein ligase mind-bomb.
   
 0.622
EGR_02945
Suppressor of hairless protein.
    
 0.611
EGR_02944
Uncharacterized protein.
    
 0.611
EGR_03072
Tyrosine-protein kinase-like 7.
    
 0.598
EGR_03391
Titin.
   
 0.565
EGR_02050
Disorganized muscle protein.
    
 0.559
EGR_09712
Myosin light chain kinase, smooth muscle.
   
 0.523
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.