STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_06445Ubiquitin-fold modifier. (100 aa)    
Predicted Functional Partners:
EGR_01038
Ubiquitin-like modifier-activating enzyme.
   
 
 0.964
EGR_09081
Ufm1-specific protease.
    
 
 0.958
EGR_04287
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
   
 
 0.932
EGR_02950
DDRGK domain-containing protein.
    
 
 0.741
EGR_07170
NEDD8-activating enzyme E1 catalytic subunit.
   
 
 0.704
EGR_02076
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
 
    
 0.679
EGR_01284
NEDD8 protein.
    
 
 0.667
EGR_05334
Adenylyltransferase and sulfurtransferase MOCS3.
   
 
 0.663
EGR_05335
Adenylyltransferase and sulfurtransferase MOCS3.
   
 
 0.663
EGR_05361
Ubiquitin-like modifier-activating enzyme; Belongs to the ubiquitin-activating E1 family.
   
 
 0.658
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.