STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_02138Troponin T. (392 aa)    
Predicted Functional Partners:
EGR_06361
Troponin I 4.
  
0.998
EGR_06863
Uncharacterized protein.
   
 0.973
EGR_01405
Myosin essential light chain, striated adductor muscle.
  
 0.960
EGR_03372
Myosin catalytic light chain LC-1, mantle muscle.
  
 0.959
EGR_08179
Tropomyosin-2.
   
 0.951
EGR_02101
Tropomyosin.
   
 0.951
EGR_09153
Myosin-2 essential light chain.
   
 0.943
EGR_05954
Alpha-actinin-2.
   
 0.922
EGR_01584
Alpha-actinin, sarcomeric.
   
 0.811
EGR_05647
Myosin regulatory light chain A, smooth adductor muscle.
   
 0.795
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.