STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_01407Coiled-coil domain-containing protein. (440 aa)    
Predicted Functional Partners:
EGR_08391
Leucine-rich repeat serine/threonine-protein kinase.
   
 0.652
EGR_08390
Leucine-rich repeat serine/threonine-protein kinase.
   
 0.652
EGR_09083
Coiled-coil domain-containing protein.
    
 
 0.633
EGR_00154
Intraflagellar transport protein.
   
 
 0.602
EGR_08557
Serine/threonine-protein kinase PLK4.
   
 0.595
EGR_01044
Serine/threonine-protein kinase PLK1.
   
 0.595
EGR_03263
Coiled-coil domain-containing protein 65.
   
 
 0.575
EGR_03051
Radial spoke head-like protein.
   
 
 0.556
EGR_07295
Inner dynein arm light chain, axonemal.
    
 
 0.534
EGR_01439
Armadillo repeat-containing protein 4.
   
 
 0.517
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.