STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00323Condensin complex subunit. (1530 aa)    
Predicted Functional Partners:
EGR_00441
Condensin complex subunit 2.
   
 0.999
EGR_07285
Structural maintenance of chromosomes protein.
   
 0.999
EGR_04567
Structural maintenance of chromosomes protein.
   
 0.999
EGR_02478
Condensin complex subunit 3.
   
 0.998
EGR_03169
Structural maintenance of chromosomes protein 3.
   
 0.940
EGR_01072
DNA polymerase alpha catalytic subunit.
   
  
 0.927
EGR_00114
Structural maintenance of chromosomes protein 1A.
   
 0.897
EGR_00115
Uncharacterized protein.
   
 0.897
EGR_03464
Kinesin-related motor protein Eg5; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.856
EGR_03077
DNA helicase; Belongs to the MCM family.
   
  
 0.748
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.