STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EmuJ_001033400Nucleolar protein 10. (513 aa)    
Predicted Functional Partners:
EmuJ_000954800
Ribosome biolocus tagsis protein BMS1.
   
 
 0.999
A0A068Y2S1
Expressed conserved protein.
   
 
 0.998
EmuJ_000864200
Nucleolar protein 6.
   
 
 0.998
EmuJ_000930900
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.998
EmuJ_000091000
Bystin.
   
 
 0.998
EmuJ_000162500
WD repeat containing protein 36.
   
 
 0.998
EmuJ_000220800
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.998
EmuJ_000535800
Nucleolar complex protein 4.
   
 
 0.997
A0A068Y8E3
WD repeat containing protein 46.
   
 
 0.997
EmuJ_000886300
Periodic tryptophan protein 2.
   
 
 0.997
Your Current Organism:
Echinococcus multilocularis
NCBI taxonomy Id: 6211
Other names: E. multilocularis
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.