STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB94939.1GLPGLI family protein. (251 aa)    
Predicted Functional Partners:
SKB94928.1
Hypothetical protein.
 
     0.938
SKB94949.1
GLPGLI family protein.
 
    
0.782
SKB26406.1
GLPGLI family protein.
  
     0.775
SKB26417.1
GLPGLI family protein.
  
     0.775
SKB26440.1
GLPGLI family protein.
  
     0.775
SKB26444.1
GLPGLI family protein.
  
     0.775
SKB26475.1
GLPGLI family protein.
  
     0.775
SKB26270.1
GLPGLI family protein.
  
     0.774
SKB26400.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.773
SKB86931.1
Hypothetical protein.
  
     0.773
Your Current Organism:
Parapedobacter luteus
NCBI taxonomy Id: 623280
Other names: DSM 22899, JCM 15977, KACC 10955, P. luteus, Parapedobacter luteus Kim et al. 2010, Parapedobacter sp. 4M29, strain 4M29
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