STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBG00344Purple acid phosphatase. (418 aa)    
Predicted Functional Partners:
pho-13
Protein CBG03178; Belongs to the histidine acid phosphatase family.
   
  
 0.668
CBG00997
Protein CBG00997; Belongs to the histidine acid phosphatase family.
   
  
 0.650
pho-12
Protein CBG02310; Belongs to the histidine acid phosphatase family.
   
  
 0.650
pho-14
Protein CBG07203; Belongs to the histidine acid phosphatase family.
   
  
 0.647
nas-14
Metalloendopeptidase.
      
 0.645
pho-4
Protein CBR-PHO-4; Belongs to the histidine acid phosphatase family.
   
  
 0.638
pho-11
Protein CBG01002; Belongs to the histidine acid phosphatase family.
   
  
 0.571
pho-1
Protein CBR-PHO-1; Belongs to the histidine acid phosphatase family.
   
  
 0.528
alh-13
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.498
ndx-9
Protein CBR-NDX-9.
    
 0.432
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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