Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG01302 | CBG03309 | A8WQ32 | A8WSB8 | Protein CBG01302; Belongs to the cytochrome P450 family. | Protein CBG03309. | 0.559 |
CBG01302 | cyp-34a9 | A8WQ32 | A8WQ02 | Protein CBG01302; Belongs to the cytochrome P450 family. | Protein CBR-CYP-34A9; Belongs to the cytochrome P450 family. | 0.605 |
CBG01302 | mdt-17 | A8WQ32 | A8XGN3 | Protein CBG01302; Belongs to the cytochrome P450 family. | Protein CBR-MDT-17. | 0.621 |
CBG01302 | mdt-20 | A8WQ32 | Q61A42 | Protein CBG01302; Belongs to the cytochrome P450 family. | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.600 |
CBG01302 | mdt-31 | A8WQ32 | Q61DP3 | Protein CBG01302; Belongs to the cytochrome P450 family. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.590 |
CBG01302 | mdt-4 | A8WQ32 | Q621Z7 | Protein CBG01302; Belongs to the cytochrome P450 family. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.600 |
CBG01302 | mdt-6 | A8WQ32 | Q60WM1 | Protein CBG01302; Belongs to the cytochrome P450 family. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.612 |
CBG01302 | pks-1 | A8WQ32 | A8XKG1 | Protein CBG01302; Belongs to the cytochrome P450 family. | Protein CBG14683. | 0.870 |
CBG01302 | rgr-1 | A8WQ32 | Q61IR6 | Protein CBG01302; Belongs to the cytochrome P450 family. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.614 |
CBG01302 | sur-2 | A8WQ32 | Q60UZ5 | Protein CBG01302; Belongs to the cytochrome P450 family. | Mediator of RNA polymerase II transcription subunit 23; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.582 |
CBG03309 | CBG01302 | A8WSB8 | A8WQ32 | Protein CBG03309. | Protein CBG01302; Belongs to the cytochrome P450 family. | 0.559 |
CBG03309 | mdt-17 | A8WSB8 | A8XGN3 | Protein CBG03309. | Protein CBR-MDT-17. | 0.962 |
CBG03309 | mdt-20 | A8WSB8 | Q61A42 | Protein CBG03309. | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.958 |
CBG03309 | mdt-31 | A8WSB8 | Q61DP3 | Protein CBG03309. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.963 |
CBG03309 | mdt-4 | A8WSB8 | Q621Z7 | Protein CBG03309. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.960 |
CBG03309 | mdt-6 | A8WSB8 | Q60WM1 | Protein CBG03309. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.964 |
CBG03309 | rgr-1 | A8WSB8 | Q61IR6 | Protein CBG03309. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.962 |
CBG03309 | sur-2 | A8WSB8 | Q60UZ5 | Protein CBG03309. | Mediator of RNA polymerase II transcription subunit 23; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.950 |
cyp-34a9 | CBG01302 | A8WQ02 | A8WQ32 | Protein CBR-CYP-34A9; Belongs to the cytochrome P450 family. | Protein CBG01302; Belongs to the cytochrome P450 family. | 0.605 |
cyp-34a9 | pks-1 | A8WQ02 | A8XKG1 | Protein CBR-CYP-34A9; Belongs to the cytochrome P450 family. | Protein CBG14683. | 0.847 |
page 1 of 4