Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ceh-14 | unc-3 | A8XPP0 | A8X4H7 | Protein CBR-CEH-14. | Protein CBR-UNC-3. | 0.643 |
ceh-14 | unc-30 | A8XPP0 | A8WQQ9 | Protein CBR-CEH-14. | Homeobox protein. | 0.550 |
ceh-14 | unc-86 | A8XPP0 | A8XP93 | Protein CBR-CEH-14. | POU domain protein. | 0.726 |
lin-53 | mcm-6 | Q61Y48 | Q61J08 | Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription. | DNA replication licensing factor mcm-6; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentia [...] | 0.444 |
lin-53 | unc-30 | Q61Y48 | A8WQQ9 | Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription. | Homeobox protein. | 0.632 |
mcm-6 | lin-53 | Q61J08 | Q61Y48 | DNA replication licensing factor mcm-6; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentia [...] | Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription. | 0.444 |
mcm-6 | unc-30 | Q61J08 | A8WQQ9 | DNA replication licensing factor mcm-6; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentia [...] | Homeobox protein. | 0.530 |
oig-1 | unc-25 | A8XE11 | A8XMQ1 | Protein CBR-OIG-1. | Protein CBR-UNC-25. | 0.479 |
oig-1 | unc-30 | A8XE11 | A8WQQ9 | Protein CBR-OIG-1. | Homeobox protein. | 0.752 |
oig-1 | unc-46 | A8XE11 | A8X6U4 | Protein CBR-OIG-1. | Protein CBR-UNC-46. | 0.630 |
oig-1 | unc-47 | A8XE11 | A8X9N7 | Protein CBR-OIG-1. | Protein CBR-UNC-47. | 0.577 |
oig-1 | unc-55 | A8XE11 | H8WGZ9 | Protein CBR-OIG-1. | Protein CBR-UNC-55, isoform a. | 0.737 |
unc-25 | oig-1 | A8XMQ1 | A8XE11 | Protein CBR-UNC-25. | Protein CBR-OIG-1. | 0.479 |
unc-25 | unc-30 | A8XMQ1 | A8WQQ9 | Protein CBR-UNC-25. | Homeobox protein. | 0.750 |
unc-25 | unc-46 | A8XMQ1 | A8X6U4 | Protein CBR-UNC-25. | Protein CBR-UNC-46. | 0.640 |
unc-25 | unc-47 | A8XMQ1 | A8X9N7 | Protein CBR-UNC-25. | Protein CBR-UNC-47. | 0.953 |
unc-3 | ceh-14 | A8X4H7 | A8XPP0 | Protein CBR-UNC-3. | Protein CBR-CEH-14. | 0.643 |
unc-3 | unc-30 | A8X4H7 | A8WQQ9 | Protein CBR-UNC-3. | Homeobox protein. | 0.753 |
unc-3 | unc-47 | A8X4H7 | A8X9N7 | Protein CBR-UNC-3. | Protein CBR-UNC-47. | 0.499 |
unc-3 | unc-55 | A8X4H7 | H8WGZ9 | Protein CBR-UNC-3. | Protein CBR-UNC-55, isoform a. | 0.550 |
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