Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBG27201 | inx-19 | B6IL31 | A8WVX4 | Protein CBG27201. | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | 0.665 |
CBG27201 | nsy-1 | B6IL31 | A8WUN1 | Protein CBG27201. | Protein CBR-NSY-1. | 0.559 |
CBG27201 | nsy-4 | B6IL31 | A8XPW0 | Protein CBG27201. | Protein CBR-NSY-4. | 0.557 |
CBG27201 | nsy-7 | B6IL31 | A8WRF2 | Protein CBG27201. | Protein CBR-NSY-7. | 0.625 |
CBG27201 | olrn-1 | B6IL31 | A8X480 | Protein CBG27201. | Protein CBR-OLRN-1. | 0.630 |
CBG27201 | srsx-3 | B6IL31 | A8X6Y5 | Protein CBG27201. | Protein CBR-SRSX-3. | 0.681 |
die-1 | inx-19 | A8WTQ5 | A8WVX4 | Protein CBR-DIE-1. | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | 0.633 |
die-1 | nsy-4 | A8WTQ5 | A8XPW0 | Protein CBR-DIE-1. | Protein CBR-NSY-4. | 0.639 |
die-1 | srsx-3 | A8WTQ5 | A8X6Y5 | Protein CBR-DIE-1. | Protein CBR-SRSX-3. | 0.524 |
inx-19 | CBG27201 | A8WVX4 | B6IL31 | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | Protein CBG27201. | 0.665 |
inx-19 | die-1 | A8WVX4 | A8WTQ5 | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | Protein CBR-DIE-1. | 0.633 |
inx-19 | nsy-1 | A8WVX4 | A8WUN1 | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | Protein CBR-NSY-1. | 0.643 |
inx-19 | nsy-4 | A8WVX4 | A8XPW0 | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | Protein CBR-NSY-4. | 0.864 |
inx-19 | nsy-7 | A8WVX4 | A8WRF2 | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | Protein CBR-NSY-7. | 0.685 |
inx-19 | olrn-1 | A8WVX4 | A8X480 | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | Protein CBR-OLRN-1. | 0.665 |
inx-19 | srsx-3 | A8WVX4 | A8X6Y5 | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | Protein CBR-SRSX-3. | 0.745 |
inx-19 | str-2 | A8WVX4 | A8XVH9 | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | Protein CBR-STR-2. | 0.665 |
inx-19 | tir-1 | A8WVX4 | A8WVG1 | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | Protein CBR-TIR-1. | 0.639 |
inx-19 | unc-43 | A8WVX4 | A8WXF6 | Innexin-19; Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling (By similarity); Belongs to the pannexin family. | Calcium/calmodulin-dependent protein kinase type II; Role in locomotion and neuronal cell fate specification. Required for the regulation of synaptic density, egg laying, defecation, and meiotic maturation. Required for viability under chronic osmotic stress in which it acts downstream of osr-1. Regulates the synaptic trafficking of glr-1. Bidirectional modulator of neurotransmitter release with negative modulatory effects mainly mediated via slo-1 activation. May suppress the functional response to an internal pacemaker, perhaps by modulating the activity of the IP3 receptor (By simil [...] | 0.634 |
nsy-1 | CBG27201 | A8WUN1 | B6IL31 | Protein CBR-NSY-1. | Protein CBG27201. | 0.559 |
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