STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aqp-3Protein CBR-AQP-3; Belongs to the MIP/aquaporin (TC 1.A.8) family. (419 aa)    
Predicted Functional Partners:
aqp-4
Protein CBR-AQP-4; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.984
aqp-5
Protein CBR-AQP-5; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.980
aqp-11
Aquaporin; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.886
aqp-6
Protein CBR-AQP-6; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
 0.729
CBG18455
Protein CBG18455.
  
 
 0.675
CBG10994
Protein CBG10994.
  
 
 0.668
CBG18255
Protein CBG18255.
  
 
 0.668
hpx-2
Protein CBG11467.
    
 
 0.644
CBG23920
Protein CBG23920; Belongs to the AAA ATPase family.
  
 
 0.638
mei-1
Meiotic spindle formation protein mei-1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays. This activity may promote rapid reorganization of cellular microtubule arrays. Required specifically for meiotic spindle formation in the female germline; the presence of this protein is inimical to the formation of mitotic spindles.
  
 
 0.638
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.