STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ard-1Protein CBR-ARD-1; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (272 aa)    
Predicted Functional Partners:
CBG14899
Protein CBG14899.
    
 0.979
ech-7
Protein CBR-ECH-7; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.812
CBG09979
Protein CBG09979; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.812
ech-6
Protein CBR-ECH-6; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.812
CBG03983
Protein CBG03983.
   
  
 0.807
acaa-2
Protein CBG24278; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.760
CBG03455
Protein CBG03455.
    
 0.743
CBG09110
Protein CBG09110.
    
 0.743
CBG18804
Protein CBG18804.
    
 0.743
ech-3
Protein CBR-ECH-3; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.669
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
Server load: low (24%) [HD]